Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHDQ96IW2 TREX1-205ENST00000625293 1783 ntBASIC18.71■□□□□ 0.59
SHDQ96IW2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SHDQ96IW2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHDQ96IW2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHDQ96IW2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHDQ96IW2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHDQ96IW2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHDQ96IW2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.71■□□□□ 0.59
SHDQ96IW2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SHDQ96IW2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHDQ96IW2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.71■□□□□ 0.59
SHDQ96IW2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHDQ96IW2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHDQ96IW2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.71■□□□□ 0.59
SHDQ96IW2 MTDHP3-201ENST00000594186 672 ntBASIC18.71■□□□□ 0.59
SHDQ96IW2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHDQ96IW2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.71■□□□□ 0.59
SHDQ96IW2 MIR7706-201ENST00000613747 67 ntBASIC18.71■□□□□ 0.59
SHDQ96IW2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.71■□□□□ 0.59
SHDQ96IW2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.71■□□□□ 0.59
SHDQ96IW2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.71■□□□□ 0.59
SHDQ96IW2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHDQ96IW2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHDQ96IW2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.71■□□□□ 0.59
SHDQ96IW2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHDQ96IW2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.71■□□□□ 0.59
SHDQ96IW2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SHDQ96IW2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
SHDQ96IW2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.7■□□□□ 0.58
SHDQ96IW2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.7■□□□□ 0.58
SHDQ96IW2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SHDQ96IW2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.7■□□□□ 0.58
SHDQ96IW2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.7■□□□□ 0.58
SHDQ96IW2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.7■□□□□ 0.58
SHDQ96IW2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.7■□□□□ 0.58
SHDQ96IW2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.7■□□□□ 0.58
SHDQ96IW2 AL691403.2-201ENST00000618460 490 ntBASIC18.7■□□□□ 0.58
SHDQ96IW2 AC116407.3-201ENST00000623905 1129 ntBASIC18.7■□□□□ 0.58
SHDQ96IW2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.7■□□□□ 0.58
SHDQ96IW2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.7■□□□□ 0.58
SHDQ96IW2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHDQ96IW2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.69■□□□□ 0.58
SHDQ96IW2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SHDQ96IW2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHDQ96IW2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SHDQ96IW2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHDQ96IW2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHDQ96IW2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHDQ96IW2 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.69■□□□□ 0.58
SHDQ96IW2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SHDQ96IW2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SHDQ96IW2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.69■□□□□ 0.58
SHDQ96IW2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.69■□□□□ 0.58
SHDQ96IW2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SHDQ96IW2 FGFR3P6-201ENST00000457012 610 ntBASIC18.69■□□□□ 0.58
SHDQ96IW2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.69■□□□□ 0.58
SHDQ96IW2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.69■□□□□ 0.58
SHDQ96IW2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHDQ96IW2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHDQ96IW2 AL049840.3-201ENST00000602669 611 ntBASIC18.69■□□□□ 0.58
SHDQ96IW2 AC027601.4-201ENST00000611259 610 ntBASIC18.69■□□□□ 0.58
SHDQ96IW2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHDQ96IW2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.69■□□□□ 0.58
SHDQ96IW2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHDQ96IW2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHDQ96IW2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SHDQ96IW2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHDQ96IW2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SHDQ96IW2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.68■□□□□ 0.58
SHDQ96IW2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.68■□□□□ 0.58
SHDQ96IW2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.68■□□□□ 0.58
SHDQ96IW2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SHDQ96IW2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 RCN1P2-201ENST00000398357 915 ntBASIC18.68■□□□□ 0.58
SHDQ96IW2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.68■□□□□ 0.58
SHDQ96IW2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms