Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Mypopos-202ENSMUST00000205975 2321 ntBASIC9.91□□□□□ -0.82
Cystm1Q8K353 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC9.91□□□□□ -0.82
Cystm1Q8K353 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Nupl1-207ENSMUST00000225311 2475 ntBASIC9.91□□□□□ -0.82
Cystm1Q8K353 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Cystm1Q8K353 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Gm37297-201ENSMUST00000192974 2384 ntBASIC9.91□□□□□ -0.82
Cystm1Q8K353 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Gm27463-201ENSMUST00000183569 57 ntBASIC9.91□□□□□ -0.82
Cystm1Q8K353 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC9.91□□□□□ -0.82
Cystm1Q8K353 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Cystm1Q8K353 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 AC122901.1-201ENSMUST00000214203 1790 ntBASIC9.91□□□□□ -0.82
Cystm1Q8K353 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cystm1Q8K353 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Gm20472-201ENSMUST00000174403 1240 ntBASIC9.9□□□□□ -0.82
Cystm1Q8K353 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cystm1Q8K353 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Cystm1Q8K353 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Cystm1Q8K353 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Cystm1Q8K353 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cystm1Q8K353 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Cystm1Q8K353 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cystm1Q8K353 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cystm1Q8K353 Rubie-203ENSMUST00000227803 2430 ntBASIC9.9□□□□□ -0.83
Cystm1Q8K353 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms