Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 MIR943-201ENST00000401286 94 ntBASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 VN2R19P-201ENST00000442399 1052 ntBASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.8■□□□□ 0.92
COL13A1Q5TAT6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 AC136632.2-201ENST00000512891 861 ntBASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 AC010336.2-201ENST00000564226 506 ntBASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL13A1Q5TAT6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 LINC01126-201ENST00000623515 1646 ntBASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL13A1Q5TAT6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 HCG4-201ENST00000418983 998 ntBASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 MIR4751-201ENST00000578027 74 ntBASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 AC022145.2-201ENST00000598203 171 ntBASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL13A1Q5TAT6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COL13A1Q5TAT6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 MIR4525-201ENST00000580000 75 ntBASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms