Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CDH15P55291 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CDH15P55291 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CDH15P55291 AC010980.2-201ENST00000587099 1412 ntBASIC17.33■□□□□ 0.36
CDH15P55291 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH15P55291 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH15P55291 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH15P55291 MCRIP2P1-201ENST00000394346 511 ntBASIC17.33■□□□□ 0.36
CDH15P55291 KRT18P29-201ENST00000397031 1267 ntBASIC17.33■□□□□ 0.36
CDH15P55291 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.33■□□□□ 0.36
CDH15P55291 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.33■□□□□ 0.36
CDH15P55291 AC083880.1-201ENST00000608266 535 ntBASIC17.33■□□□□ 0.36
CDH15P55291 MYC-209ENST00000641252 345 ntBASIC17.33■□□□□ 0.36
CDH15P55291 AC022211.2-201ENST00000585075 2527 ntBASIC17.33■□□□□ 0.36
CDH15P55291 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH15P55291 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH15P55291 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDH15P55291 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH15P55291 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH15P55291 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH15P55291 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH15P55291 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH15P55291 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH15P55291 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH15P55291 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH15P55291 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH15P55291 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDH15P55291 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.32■□□□□ 0.36
CDH15P55291 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH15P55291 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH15P55291 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDH15P55291 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH15P55291 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH15P55291 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDH15P55291 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDH15P55291 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDH15P55291 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH15P55291 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDH15P55291 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CDH15P55291 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CDH15P55291 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH15P55291 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH15P55291 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.32■□□□□ 0.36
CDH15P55291 AC008687.6-201ENST00000596318 630 ntBASIC17.32■□□□□ 0.36
CDH15P55291 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.32■□□□□ 0.36
CDH15P55291 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
CDH15P55291 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDH15P55291 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH15P55291 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH15P55291 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDH15P55291 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH15P55291 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CDH15P55291 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDH15P55291 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDH15P55291 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CDH15P55291 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH15P55291 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDH15P55291 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.31■□□□□ 0.36
CDH15P55291 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH15P55291 AC091874.3-201ENST00000512672 1195 ntBASIC17.31■□□□□ 0.36
CDH15P55291 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH15P55291 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH15P55291 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CDH15P55291 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH15P55291 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDH15P55291 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH15P55291 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH15P55291 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms