Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NCK1P16333 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NCK1P16333 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCK1P16333 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.58■□□□□ 0.4
NCK1P16333 GUSBP6-202ENST00000438529 1198 ntBASIC17.58■□□□□ 0.4
NCK1P16333 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.58■□□□□ 0.4
NCK1P16333 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.58■□□□□ 0.4
NCK1P16333 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.58■□□□□ 0.4
NCK1P16333 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.58■□□□□ 0.4
NCK1P16333 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCK1P16333 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NCK1P16333 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.58■□□□□ 0.4
NCK1P16333 AC138028.4-201ENST00000564984 1845 ntBASIC17.58■□□□□ 0.4
NCK1P16333 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.58■□□□□ 0.4
NCK1P16333 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCK1P16333 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCK1P16333 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.58■□□□□ 0.4
NCK1P16333 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NCK1P16333 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCK1P16333 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.58■□□□□ 0.4
NCK1P16333 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCK1P16333 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.57■□□□□ 0.4
NCK1P16333 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.57■□□□□ 0.4
NCK1P16333 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.57■□□□□ 0.4
NCK1P16333 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.57■□□□□ 0.4
NCK1P16333 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 SLC29A4P1-201ENST00000398760 971 ntBASIC17.57■□□□□ 0.4
NCK1P16333 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.57■□□□□ 0.4
NCK1P16333 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.57■□□□□ 0.4
NCK1P16333 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.57■□□□□ 0.4
NCK1P16333 C1QL1P1-201ENST00000568105 661 ntBASIC17.57■□□□□ 0.4
NCK1P16333 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.57■□□□□ 0.4
NCK1P16333 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NCK1P16333 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCK1P16333 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.56■□□□□ 0.4
NCK1P16333 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCK1P16333 AL357033.4-201ENST00000617703 1807 ntBASIC17.56■□□□□ 0.4
NCK1P16333 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCK1P16333 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NCK1P16333 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.56■□□□□ 0.4
NCK1P16333 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.56■□□□□ 0.4
NCK1P16333 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCK1P16333 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCK1P16333 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCK1P16333 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCK1P16333 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCK1P16333 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NCK1P16333 AC006970.2-201ENST00000450065 779 ntBASIC17.56■□□□□ 0.4
NCK1P16333 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NCK1P16333 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCK1P16333 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.56■□□□□ 0.4
NCK1P16333 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NCK1P16333 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NCK1P16333 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NCK1P16333 AC099398.1-201ENST00000567919 2776 ntBASIC17.56■□□□□ 0.4
NCK1P16333 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCK1P16333 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.55■□□□□ 0.4
NCK1P16333 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.55■□□□□ 0.4
NCK1P16333 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.55■□□□□ 0.4
NCK1P16333 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NCK1P16333 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NCK1P16333 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.55■□□□□ 0.4
NCK1P16333 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.55■□□□□ 0.4
NCK1P16333 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.55■□□□□ 0.4
NCK1P16333 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.55■□□□□ 0.4
NCK1P16333 AC098934.4-201ENST00000564127 592 ntBASIC17.55■□□□□ 0.4
NCK1P16333 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NCK1P16333 MIR4758-201ENST00000577688 71 ntBASIC17.55■□□□□ 0.4
NCK1P16333 AC083880.1-201ENST00000608266 535 ntBASIC17.55■□□□□ 0.4
NCK1P16333 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NCK1P16333 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
NCK1P16333 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.55■□□□□ 0.4
NCK1P16333 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 KRT8P32-201ENST00000512863 1461 ntBASIC17.55■□□□□ 0.4
NCK1P16333 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms