Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 MED22-202ENST00000371999 987 ntTSL 3 BASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 KRT18P67-201ENST00000432816 1264 ntBASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 AF186996.4-201ENST00000467186 377 ntBASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 AC096582.2-201ENST00000510860 516 ntBASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 MIR5100-201ENST00000579544 119 ntBASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 AC148477.8-201ENST00000624298 468 ntBASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 AC068587.9-201ENST00000641814 219 ntBASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.57■■□□□ 1.52
CSB-PGBD3P0DP91 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 PCDHAC2-203ENST00000615316 3011 ntBASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
CSB-PGBD3P0DP91 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 Z98044.1-201ENST00000632503 1764 ntBASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
CSB-PGBD3P0DP91 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 FP475955.4-201ENST00000623131 1990 ntBASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 IRF8-202ENST00000562492 946 ntTSL 3 BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CSB-PGBD3P0DP91 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 HES2-202ENST00000377836 507 ntTSL 2 BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 AC093909.1-201ENST00000504731 1122 ntBASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CSB-PGBD3P0DP91 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms