Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.62■□□□□ 0.73
RB1P06400 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RB1P06400 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RB1P06400 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RB1P06400 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.62■□□□□ 0.73
RB1P06400 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RB1P06400 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RB1P06400 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.62■□□□□ 0.73
RB1P06400 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.61■□□□□ 0.73
RB1P06400 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.61■□□□□ 0.73
RB1P06400 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.61■□□□□ 0.73
RB1P06400 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RB1P06400 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.61■□□□□ 0.73
RB1P06400 AC243591.1-201ENST00000452967 1364 ntBASIC19.61■□□□□ 0.73
RB1P06400 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.61■□□□□ 0.73
RB1P06400 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RB1P06400 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.61■□□□□ 0.73
RB1P06400 RPL13AP23-201ENST00000480739 586 ntBASIC19.61■□□□□ 0.73
RB1P06400 AC073648.2-201ENST00000510116 352 ntBASIC19.61■□□□□ 0.73
RB1P06400 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
RB1P06400 AC008687.5-201ENST00000593746 558 ntBASIC19.61■□□□□ 0.73
RB1P06400 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.61■□□□□ 0.73
RB1P06400 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.61■□□□□ 0.73
RB1P06400 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RB1P06400 AL355877.3-201ENST00000622820 899 ntBASIC19.61■□□□□ 0.73
RB1P06400 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RB1P06400 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.61■□□□□ 0.73
RB1P06400 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RB1P06400 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.61■□□□□ 0.73
RB1P06400 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RB1P06400 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RB1P06400 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RB1P06400 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RB1P06400 IRX1P1-201ENST00000438849 1838 ntBASIC19.6■□□□□ 0.73
RB1P06400 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.6■□□□□ 0.73
RB1P06400 ZNF259P1-201ENST00000407656 1365 ntBASIC19.6■□□□□ 0.73
RB1P06400 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RB1P06400 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RB1P06400 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RB1P06400 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RB1P06400 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RB1P06400 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.6■□□□□ 0.73
RB1P06400 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RB1P06400 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RB1P06400 RPS2P28-201ENST00000314255 741 ntBASIC19.6■□□□□ 0.73
RB1P06400 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RB1P06400 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.6■□□□□ 0.73
RB1P06400 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.6■□□□□ 0.73
RB1P06400 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.6■□□□□ 0.73
RB1P06400 SCARNA2-201ENST00000458748 420 ntBASIC19.6■□□□□ 0.73
RB1P06400 POLD2P1-201ENST00000511220 997 ntBASIC19.6■□□□□ 0.73
RB1P06400 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.6■□□□□ 0.73
RB1P06400 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.6■□□□□ 0.73
RB1P06400 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RB1P06400 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RB1P06400 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RB1P06400 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.6■□□□□ 0.73
RB1P06400 TREX1-205ENST00000625293 1783 ntBASIC19.6■□□□□ 0.73
RB1P06400 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
RB1P06400 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.59■□□□□ 0.73
RB1P06400 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.59■□□□□ 0.73
RB1P06400 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RB1P06400 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 RBM17P3-201ENST00000417687 1192 ntBASIC19.59■□□□□ 0.73
RB1P06400 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 AC092183.1-201ENST00000469884 875 ntBASIC19.59■□□□□ 0.73
RB1P06400 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.59■□□□□ 0.73
RB1P06400 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.59■□□□□ 0.73
RB1P06400 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.59■□□□□ 0.73
RB1P06400 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.59■□□□□ 0.73
RB1P06400 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.59■□□□□ 0.73
RB1P06400 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.59■□□□□ 0.73
RB1P06400 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.59■□□□□ 0.73
RB1P06400 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RB1P06400 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.59■□□□□ 0.73
RB1P06400 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RB1P06400 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.59■□□□□ 0.73
RB1P06400 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.59■□□□□ 0.73
RB1P06400 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
RB1P06400 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RB1P06400 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.59■□□□□ 0.73
RB1P06400 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RB1P06400 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RB1P06400 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RB1P06400 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RB1P06400 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RB1P06400 Z98044.1-201ENST00000632503 1764 ntBASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms