Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PHGDHO43175 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHGDHO43175 FAM197Y1-201ENST00000421178 764 ntBASIC18.51■□□□□ 0.55
PHGDHO43175 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.51■□□□□ 0.55
PHGDHO43175 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PHGDHO43175 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.51■□□□□ 0.55
PHGDHO43175 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.51■□□□□ 0.55
PHGDHO43175 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.51■□□□□ 0.55
PHGDHO43175 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PHGDHO43175 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
PHGDHO43175 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PHGDHO43175 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.51■□□□□ 0.55
PHGDHO43175 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PHGDHO43175 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHGDHO43175 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHGDHO43175 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHGDHO43175 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHGDHO43175 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHGDHO43175 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHGDHO43175 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHGDHO43175 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PHGDHO43175 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
PHGDHO43175 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHGDHO43175 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHGDHO43175 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
PHGDHO43175 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHGDHO43175 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PHGDHO43175 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHGDHO43175 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
PHGDHO43175 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.5■□□□□ 0.55
PHGDHO43175 AC068880.1-201ENST00000507289 2297 ntBASIC18.5■□□□□ 0.55
PHGDHO43175 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PHGDHO43175 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHGDHO43175 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.5■□□□□ 0.55
PHGDHO43175 TSPY20P-201ENST00000450910 630 ntBASIC18.5■□□□□ 0.55
PHGDHO43175 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.5■□□□□ 0.55
PHGDHO43175 FAM201B-201ENST00000458407 597 ntBASIC18.5■□□□□ 0.55
PHGDHO43175 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.5■□□□□ 0.55
PHGDHO43175 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.5■□□□□ 0.55
PHGDHO43175 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.5■□□□□ 0.55
PHGDHO43175 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHGDHO43175 HTR7P1-202ENST00000624664 4411 ntBASIC18.5■□□□□ 0.55
PHGDHO43175 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHGDHO43175 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHGDHO43175 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.49■□□□□ 0.55
PHGDHO43175 KRT8P45-201ENST00000414328 1447 ntBASIC18.49■□□□□ 0.55
PHGDHO43175 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 AC135776.1-201ENST00000319817 2481 ntBASIC18.49■□□□□ 0.55
PHGDHO43175 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 NOC2LP2-201ENST00000407594 1944 ntBASIC18.49■□□□□ 0.55
PHGDHO43175 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PHGDHO43175 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PHGDHO43175 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.49■□□□□ 0.55
PHGDHO43175 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.49■□□□□ 0.55
PHGDHO43175 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.49■□□□□ 0.55
PHGDHO43175 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.49■□□□□ 0.55
PHGDHO43175 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 AL162741.1-201ENST00000565563 1558 ntBASIC18.49■□□□□ 0.55
PHGDHO43175 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.49■□□□□ 0.55
PHGDHO43175 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.49■□□□□ 0.55
PHGDHO43175 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PHGDHO43175 AC008556.1-201ENST00000610908 2040 ntBASIC18.49■□□□□ 0.55
PHGDHO43175 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.49■□□□□ 0.55
PHGDHO43175 AC112777.1-201ENST00000540175 1423 ntBASIC18.49■□□□□ 0.55
PHGDHO43175 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PHGDHO43175 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PHGDHO43175 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PHGDHO43175 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PHGDHO43175 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PHGDHO43175 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PHGDHO43175 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.48■□□□□ 0.55
PHGDHO43175 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PHGDHO43175 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PHGDHO43175 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.48■□□□□ 0.55
PHGDHO43175 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.48■□□□□ 0.55
PHGDHO43175 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PHGDHO43175 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.48■□□□□ 0.55
PHGDHO43175 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PHGDHO43175 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PHGDHO43175 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.48■□□□□ 0.55
PHGDHO43175 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PHGDHO43175 KRT18P29-201ENST00000397031 1267 ntBASIC18.48■□□□□ 0.55
PHGDHO43175 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.48■□□□□ 0.55
PHGDHO43175 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PHGDHO43175 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.48■□□□□ 0.55
PHGDHO43175 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.48■□□□□ 0.55
PHGDHO43175 AC008622.2-201ENST00000617006 1229 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms