Protein–RNA interactions for Protein: A6NNM3

RIMBP3B, RIMS-binding protein 3B, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3BA6NNM3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
RIMBP3BA6NNM3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC29.42■■■□□ 2.3
RIMBP3BA6NNM3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
RIMBP3BA6NNM3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 CYP51A1P1-201ENST00000492267 1507 ntBASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 HLA-DRB6-201ENST00000411500 1235 ntBASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 AC006557.2-201ENST00000592985 1240 ntBASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
RIMBP3BA6NNM3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 HCG4B-203ENST00000450128 991 ntBASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 AC034236.2-201ENST00000606662 1610 ntBASIC29.4■■■□□ 2.3
RIMBP3BA6NNM3 AC006333.2-201ENST00000607957 2099 ntBASIC29.39■■■□□ 2.3
RIMBP3BA6NNM3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RIMBP3BA6NNM3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC29.39■■■□□ 2.3
RIMBP3BA6NNM3 CRYGEP-201ENST00000412192 528 ntBASIC29.39■■■□□ 2.3
RIMBP3BA6NNM3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC29.39■■■□□ 2.3
RIMBP3BA6NNM3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC29.39■■■□□ 2.3
RIMBP3BA6NNM3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC29.39■■■□□ 2.3
RIMBP3BA6NNM3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC29.39■■■□□ 2.3
RIMBP3BA6NNM3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RIMBP3BA6NNM3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
RIMBP3BA6NNM3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RIMBP3BA6NNM3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
RIMBP3BA6NNM3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
RIMBP3BA6NNM3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC29.39■■■□□ 2.29
RIMBP3BA6NNM3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
RIMBP3BA6NNM3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 C9orf163-202ENST00000624034 2573 ntBASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 ELK2BP-201ENST00000415014 1224 ntBASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 AC023141.5-201ENST00000458585 616 ntBASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RIMBP3BA6NNM3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 AC006128.1-201ENST00000624704 1661 ntBASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 AC108073.2-201ENST00000464002 357 ntBASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 RNA5SP421-201ENST00000516864 134 ntBASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 TK1-204ENST00000590430 683 ntTSL 3 BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RIMBP3BA6NNM3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RIMBP3BA6NNM3 SDHAP1-207ENST00000440850 2000 ntBASIC29.36■■■□□ 2.29
RIMBP3BA6NNM3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RIMBP3BA6NNM3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RIMBP3BA6NNM3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RIMBP3BA6NNM3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RIMBP3BA6NNM3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RIMBP3BA6NNM3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RIMBP3BA6NNM3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms