Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 PMS2P7-201ENST00000506558 1336 ntBASIC21.6■■□□□ 1.05
SSC5DA1L4H1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 AC113404.2-201ENST00000507884 177 ntBASIC21.6■■□□□ 1.05
SSC5DA1L4H1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 TERC-201ENST00000602385 541 ntBASIC21.6■■□□□ 1.05
SSC5DA1L4H1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SSC5DA1L4H1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 AL163051.1-201ENST00000569214 1512 ntBASIC21.59■■□□□ 1.05
SSC5DA1L4H1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.59■■□□□ 1.05
SSC5DA1L4H1 RBM17P3-201ENST00000417687 1192 ntBASIC21.59■■□□□ 1.05
SSC5DA1L4H1 SCARNA2-201ENST00000458748 420 ntBASIC21.59■■□□□ 1.05
SSC5DA1L4H1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 IGHV3-22-201ENST00000520721 359 ntBASIC21.59■■□□□ 1.05
SSC5DA1L4H1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 TP73-AS1-210ENST00000637775 1455 ntBASIC21.59■■□□□ 1.05
SSC5DA1L4H1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSC5DA1L4H1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 AC112777.1-201ENST00000540175 1423 ntBASIC21.58■■□□□ 1.05
SSC5DA1L4H1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 AC093909.1-201ENST00000504731 1122 ntBASIC21.58■■□□□ 1.05
SSC5DA1L4H1 AC145285.3-201ENST00000564603 959 ntBASIC21.58■■□□□ 1.05
SSC5DA1L4H1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 AC116407.3-201ENST00000623905 1129 ntBASIC21.58■■□□□ 1.05
SSC5DA1L4H1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SSC5DA1L4H1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SSC5DA1L4H1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SSC5DA1L4H1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms