Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SYCE3A1L190 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.16■□□□□ 0.98
SYCE3A1L190 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SYCE3A1L190 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.16■□□□□ 0.98
SYCE3A1L190 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.16■□□□□ 0.98
SYCE3A1L190 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SYCE3A1L190 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYCE3A1L190 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SYCE3A1L190 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYCE3A1L190 AL357033.4-201ENST00000617703 1807 ntBASIC21.15■□□□□ 0.98
SYCE3A1L190 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYCE3A1L190 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYCE3A1L190 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYCE3A1L190 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
SYCE3A1L190 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYCE3A1L190 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYCE3A1L190 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYCE3A1L190 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
SYCE3A1L190 AC112777.1-201ENST00000540175 1423 ntBASIC21.15■□□□□ 0.98
SYCE3A1L190 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYCE3A1L190 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYCE3A1L190 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYCE3A1L190 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC21.15■□□□□ 0.98
SYCE3A1L190 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.15■□□□□ 0.98
SYCE3A1L190 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.15■□□□□ 0.98
SYCE3A1L190 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.15■□□□□ 0.98
SYCE3A1L190 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.15■□□□□ 0.98
SYCE3A1L190 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.15■□□□□ 0.98
SYCE3A1L190 MYC-208ENST00000641036 567 ntBASIC21.15■□□□□ 0.98
SYCE3A1L190 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.15■□□□□ 0.98
SYCE3A1L190 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SYCE3A1L190 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYCE3A1L190 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.15■□□□□ 0.98
SYCE3A1L190 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYCE3A1L190 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SYCE3A1L190 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SYCE3A1L190 KRT8P45-201ENST00000414328 1447 ntBASIC21.14■□□□□ 0.98
SYCE3A1L190 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYCE3A1L190 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYCE3A1L190 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.14■□□□□ 0.97
SYCE3A1L190 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYCE3A1L190 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SYCE3A1L190 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.14■□□□□ 0.97
SYCE3A1L190 AL050303.2-201ENST00000619798 666 ntBASIC21.14■□□□□ 0.97
SYCE3A1L190 HLA-A-209ENST00000638375 975 ntBASIC21.14■□□□□ 0.97
SYCE3A1L190 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYCE3A1L190 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SYCE3A1L190 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYCE3A1L190 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYCE3A1L190 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.14■□□□□ 0.97
SYCE3A1L190 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYCE3A1L190 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYCE3A1L190 KRT8P32-201ENST00000512863 1461 ntBASIC21.13■□□□□ 0.97
SYCE3A1L190 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYCE3A1L190 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYCE3A1L190 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYCE3A1L190 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.13■□□□□ 0.97
SYCE3A1L190 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.13■□□□□ 0.97
SYCE3A1L190 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.13■□□□□ 0.97
SYCE3A1L190 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYCE3A1L190 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.13■□□□□ 0.97
SYCE3A1L190 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SYCE3A1L190 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYCE3A1L190 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYCE3A1L190 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.13■□□□□ 0.97
SYCE3A1L190 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.13■□□□□ 0.97
SYCE3A1L190 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYCE3A1L190 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.13■□□□□ 0.97
SYCE3A1L190 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.13■□□□□ 0.97
SYCE3A1L190 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYCE3A1L190 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.13■□□□□ 0.97
SYCE3A1L190 AF201337.1-201ENST00000520239 748 ntBASIC21.13■□□□□ 0.97
SYCE3A1L190 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.13■□□□□ 0.97
SYCE3A1L190 AL121829.2-201ENST00000620908 328 ntBASIC21.13■□□□□ 0.97
SYCE3A1L190 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.13■□□□□ 0.97
SYCE3A1L190 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.13■□□□□ 0.97
SYCE3A1L190 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYCE3A1L190 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYCE3A1L190 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYCE3A1L190 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYCE3A1L190 KRT8P41-201ENST00000533985 1514 ntBASIC21.13■□□□□ 0.97
SYCE3A1L190 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.13■□□□□ 0.97
SYCE3A1L190 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYCE3A1L190 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SYCE3A1L190 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms