Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 ATP5G2P1-201ENST00000433580 426 ntBASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 AIRN-201ENST00000601203 4374 ntBASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 AL499627.1-201ENST00000569373 2188 ntBASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
SMIM28A0A1B0GU29 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 BX276092.5-203ENST00000456199 560 ntBASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 KRT18P56-201ENST00000507275 550 ntBASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 AL121672.3-201ENST00000608644 468 ntBASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 NPAP1P7-201ENST00000613027 823 ntBASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM28A0A1B0GU29 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 AC112777.1-201ENST00000540175 1423 ntBASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 TSPY22P-201ENST00000427496 604 ntBASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 HCG4P8-203ENST00000443049 980 ntBASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 KRT8P26-201ENST00000534154 1276 ntBASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM28A0A1B0GU29 MYLKP1-201ENST00000509077 1580 ntBASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 TSSC2-201ENST00000450217 709 ntBASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 AP003733.1-201ENST00000491725 852 ntBASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM28A0A1B0GU29 AC099343.3-201ENST00000605834 2503 ntBASIC19.86■□□□□ 0.77
SMIM28A0A1B0GU29 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.86■□□□□ 0.77
SMIM28A0A1B0GU29 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SMIM28A0A1B0GU29 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM28A0A1B0GU29 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM28A0A1B0GU29 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SMIM28A0A1B0GU29 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.86■□□□□ 0.77
SMIM28A0A1B0GU29 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM28A0A1B0GU29 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms