Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 KRT89P-201ENST00000620027 1478 ntBASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 AL391422.3-201ENST00000603791 2761 ntBASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 AP001269.4-201ENST00000609611 512 ntBASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.95■□□□□ 0.94
PTCH2Q9Y6C5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 AC006333.2-201ENST00000607957 2099 ntBASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 DNAJB3-201ENST00000446806 729 ntBASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 AL157384.1-201ENST00000445995 2473 ntBASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCH2Q9Y6C5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 AC092910.1-201ENST00000482027 1129 ntBASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 MIR3197-201ENST00000582241 73 ntBASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 AC034236.2-201ENST00000606662 1610 ntBASIC20.93■□□□□ 0.94
PTCH2Q9Y6C5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 DNAJB3-202ENST00000449667 1266 ntBASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms