Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 MIR940-201ENST00000401276 94 ntBASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 BX842568.4-201ENST00000421222 227 ntBASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 HIST2H3DP1-201ENST00000401004 416 ntBASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 AC073648.2-201ENST00000510116 352 ntBASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 AL355877.3-201ENST00000622820 899 ntBASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RTCBQ9Y3I0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 ZNF259P1-201ENST00000407656 1365 ntBASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 Z98044.1-201ENST00000632503 1764 ntBASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 FAM220CP-201ENST00000395253 831 ntBASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 DDT-203ENST00000403754 569 ntTSL 3 BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 DDT-206ENST00000430101 573 ntTSL 2 BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 FAM215A-202ENST00000632077 792 ntBASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 KRT8P50-201ENST00000562022 1438 ntBASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTCBQ9Y3I0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RTCBQ9Y3I0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC23.39■■□□□ 1.34
RTCBQ9Y3I0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
RTCBQ9Y3I0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 CCS-201ENST00000310190 942 ntTSL 5 BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RTCBQ9Y3I0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 RCN1P2-201ENST00000398357 915 ntBASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms