Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 MCCD1P1-208ENST00000445732 328 ntBASIC21.62■■□□□ 1.05
EFCC1Q9HA90 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
EFCC1Q9HA90 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 AKR1C7P-201ENST00000305623 895 ntBASIC21.61■■□□□ 1.05
EFCC1Q9HA90 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 KRT18P58-201ENST00000527480 1120 ntBASIC21.61■■□□□ 1.05
EFCC1Q9HA90 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 AC090616.6-201ENST00000582640 721 ntBASIC21.61■■□□□ 1.05
EFCC1Q9HA90 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 LINC00167-201ENST00000530583 1419 ntBASIC21.61■■□□□ 1.05
EFCC1Q9HA90 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EFCC1Q9HA90 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 SAPCD2P3-201ENST00000455031 850 ntBASIC21.6■■□□□ 1.05
EFCC1Q9HA90 SLC25A1P1-201ENST00000528351 927 ntBASIC21.6■■□□□ 1.05
EFCC1Q9HA90 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
EFCC1Q9HA90 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
EFCC1Q9HA90 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms