Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 AC114341.1-201ENST00000618070 349 ntBASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 NME4-212ENST00000621774 904 ntTSL 3 BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 AL163051.1-201ENST00000569214 1512 ntBASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 PMS2P1-201ENST00000431037 1228 ntBASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
PCDH11XQ9BZA7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 AC096582.2-201ENST00000510860 516 ntBASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 MOK-208ENST00000519058 917 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
PCDH11XQ9BZA7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
PCDH11XQ9BZA7 IL9RP2-201ENST00000423948 1312 ntBASIC24.08■■□□□ 1.45
PCDH11XQ9BZA7 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.08■■□□□ 1.45
PCDH11XQ9BZA7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH11XQ9BZA7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH11XQ9BZA7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.45
PCDH11XQ9BZA7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH11XQ9BZA7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH11XQ9BZA7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.08■■□□□ 1.45
PCDH11XQ9BZA7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.08■■□□□ 1.45
PCDH11XQ9BZA7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH11XQ9BZA7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
PCDH11XQ9BZA7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
PCDH11XQ9BZA7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDH11XQ9BZA7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC24.08■■□□□ 1.44
PCDH11XQ9BZA7 KRT18P67-201ENST00000432816 1264 ntBASIC24.08■■□□□ 1.44
PCDH11XQ9BZA7 FAM197Y8-203ENST00000450145 560 ntBASIC24.08■■□□□ 1.44
PCDH11XQ9BZA7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC24.08■■□□□ 1.44
PCDH11XQ9BZA7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC24.08■■□□□ 1.44
PCDH11XQ9BZA7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDH11XQ9BZA7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDH11XQ9BZA7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 AL591684.3-201ENST00000605187 298 ntBASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
PCDH11XQ9BZA7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDH11XQ9BZA7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
PCDH11XQ9BZA7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
PCDH11XQ9BZA7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH11XQ9BZA7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH11XQ9BZA7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
PCDH11XQ9BZA7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH11XQ9BZA7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH11XQ9BZA7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH11XQ9BZA7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH11XQ9BZA7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PCDH11XQ9BZA7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH11XQ9BZA7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms