Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN18Q99952 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN18Q99952 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN18Q99952 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN18Q99952 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN18Q99952 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN18Q99952 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN18Q99952 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.28■■□□□ 1
PTPN18Q99952 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN18Q99952 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PTPN18Q99952 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN18Q99952 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.28■■□□□ 1
PTPN18Q99952 RPSAP43-201ENST00000402237 625 ntBASIC21.28■■□□□ 1
PTPN18Q99952 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.28■■□□□ 1
PTPN18Q99952 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.28■■□□□ 1
PTPN18Q99952 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.28■■□□□ 1
PTPN18Q99952 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN18Q99952 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.28■■□□□ 1
PTPN18Q99952 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.28■■□□□ 1
PTPN18Q99952 AC027601.4-201ENST00000611259 610 ntBASIC21.28■■□□□ 1
PTPN18Q99952 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN18Q99952 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN18Q99952 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.28■■□□□ 1
PTPN18Q99952 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN18Q99952 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN18Q99952 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN18Q99952 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.28■■□□□ 1
PTPN18Q99952 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PTPN18Q99952 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN18Q99952 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN18Q99952 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PTPN18Q99952 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.27■■□□□ 1
PTPN18Q99952 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTPN18Q99952 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN18Q99952 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.27■■□□□ 1
PTPN18Q99952 PMS2P2-201ENST00000425039 1128 ntBASIC21.27■■□□□ 1
PTPN18Q99952 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.27■■□□□ 1
PTPN18Q99952 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.27■■□□□ 1
PTPN18Q99952 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.27■■□□□ 1
PTPN18Q99952 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.27■■□□□ 1
PTPN18Q99952 AC034105.1-201ENST00000563488 319 ntBASIC21.27■■□□□ 1
PTPN18Q99952 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.27■■□□□ 1
PTPN18Q99952 AC010327.4-202ENST00000591484 748 ntBASIC21.27■■□□□ 1
PTPN18Q99952 AP001160.2-201ENST00000596071 487 ntBASIC21.27■■□□□ 1
PTPN18Q99952 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.27■■□□□ 1
PTPN18Q99952 AC068587.9-201ENST00000641814 219 ntBASIC21.27■■□□□ 1
PTPN18Q99952 AL137060.1-201ENST00000618151 2648 ntBASIC21.27■■□□□ 1
PTPN18Q99952 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN18Q99952 KRT8P50-201ENST00000562022 1438 ntBASIC21.27■■□□□ 1
PTPN18Q99952 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.27■■□□□ 1
PTPN18Q99952 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
PTPN18Q99952 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PTPN18Q99952 AC022898.2-201ENST00000616822 1312 ntBASIC21.27■□□□□ 0.99
PTPN18Q99952 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.27■□□□□ 0.99
PTPN18Q99952 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN18Q99952 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN18Q99952 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN18Q99952 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN18Q99952 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.26■□□□□ 0.99
PTPN18Q99952 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PTPN18Q99952 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN18Q99952 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
PTPN18Q99952 RPS2P28-201ENST00000314255 741 ntBASIC21.26■□□□□ 0.99
PTPN18Q99952 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.26■□□□□ 0.99
PTPN18Q99952 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.26■□□□□ 0.99
PTPN18Q99952 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.26■□□□□ 0.99
PTPN18Q99952 AC021087.4-201ENST00000563761 564 ntBASIC21.26■□□□□ 0.99
PTPN18Q99952 AC027796.2-201ENST00000575326 344 ntBASIC21.26■□□□□ 0.99
PTPN18Q99952 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PTPN18Q99952 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.26■□□□□ 0.99
PTPN18Q99952 FAM197Y3-203ENST00000618346 717 ntBASIC21.26■□□□□ 0.99
PTPN18Q99952 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.26■□□□□ 0.99
PTPN18Q99952 IRX1P1-201ENST00000438849 1838 ntBASIC21.26■□□□□ 0.99
PTPN18Q99952 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.26■□□□□ 0.99
PTPN18Q99952 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN18Q99952 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN18Q99952 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN18Q99952 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PTPN18Q99952 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN18Q99952 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN18Q99952 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN18Q99952 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN18Q99952 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN18Q99952 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.25■□□□□ 0.99
PTPN18Q99952 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN18Q99952 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.25■□□□□ 0.99
PTPN18Q99952 AC098831.1-202ENST00000438821 336 ntBASIC21.25■□□□□ 0.99
PTPN18Q99952 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN18Q99952 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.25■□□□□ 0.99
PTPN18Q99952 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PTPN18Q99952 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.25■□□□□ 0.99
PTPN18Q99952 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.25■□□□□ 0.99
PTPN18Q99952 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN18Q99952 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.25■□□□□ 0.99
PTPN18Q99952 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.25■□□□□ 0.99
PTPN18Q99952 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PTPN18Q99952 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PTPN18Q99952 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.25■□□□□ 0.99
PTPN18Q99952 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN18Q99952 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms