Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
LITAFQ99732 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
LITAFQ99732 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
LITAFQ99732 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LITAFQ99732 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LITAFQ99732 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.39□□□□□ -0.43
LITAFQ99732 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LITAFQ99732 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LITAFQ99732 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.39□□□□□ -0.43
LITAFQ99732 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LITAFQ99732 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
LITAFQ99732 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LITAFQ99732 HES2-205ENST00000487437 968 ntTSL 3 BASIC12.39□□□□□ -0.43
LITAFQ99732 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC12.39□□□□□ -0.43
LITAFQ99732 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC12.39□□□□□ -0.43
LITAFQ99732 CICP6-201ENST00000457191 2729 ntBASIC12.39□□□□□ -0.43
LITAFQ99732 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LITAFQ99732 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LITAFQ99732 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LITAFQ99732 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LITAFQ99732 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LITAFQ99732 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LITAFQ99732 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
LITAFQ99732 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.39□□□□□ -0.43
LITAFQ99732 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
LITAFQ99732 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LITAFQ99732 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LITAFQ99732 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LITAFQ99732 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LITAFQ99732 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LITAFQ99732 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.39□□□□□ -0.43
LITAFQ99732 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
LITAFQ99732 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LITAFQ99732 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LITAFQ99732 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LITAFQ99732 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.38□□□□□ -0.43
LITAFQ99732 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.38□□□□□ -0.43
LITAFQ99732 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
LITAFQ99732 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LITAFQ99732 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LITAFQ99732 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 AL096828.2-201ENST00000567259 1965 ntBASIC12.38□□□□□ -0.43
LITAFQ99732 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LITAFQ99732 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.38□□□□□ -0.43
LITAFQ99732 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LITAFQ99732 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.38□□□□□ -0.43
LITAFQ99732 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.38□□□□□ -0.43
LITAFQ99732 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
LITAFQ99732 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
LITAFQ99732 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
LITAFQ99732 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC12.38□□□□□ -0.43
LITAFQ99732 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LITAFQ99732 AC123595.1-201ENST00000440769 1046 ntBASIC12.38□□□□□ -0.43
LITAFQ99732 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 HES2-206ENST00000489730 730 ntTSL 2 BASIC12.38□□□□□ -0.43
LITAFQ99732 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC12.38□□□□□ -0.43
LITAFQ99732 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC12.38□□□□□ -0.43
LITAFQ99732 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.38□□□□□ -0.43
LITAFQ99732 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
LITAFQ99732 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC12.38□□□□□ -0.43
LITAFQ99732 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
LITAFQ99732 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
LITAFQ99732 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
LITAFQ99732 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LITAFQ99732 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.38□□□□□ -0.43
LITAFQ99732 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LITAFQ99732 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 AC008894.3-201ENST00000624324 3103 ntBASIC12.37□□□□□ -0.43
LITAFQ99732 PCDHB19P-201ENST00000570871 2371 ntBASIC12.37□□□□□ -0.43
LITAFQ99732 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.37□□□□□ -0.43
LITAFQ99732 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 AP006587.1-201ENST00000534129 1502 ntBASIC12.37□□□□□ -0.43
LITAFQ99732 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.37□□□□□ -0.43
LITAFQ99732 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LITAFQ99732 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms