Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TIMP4Q99727 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP4Q99727 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.07■□□□□ 0.32
TIMP4Q99727 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
TIMP4Q99727 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.07■□□□□ 0.32
TIMP4Q99727 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TIMP4Q99727 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.07■□□□□ 0.32
TIMP4Q99727 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP4Q99727 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.07■□□□□ 0.32
TIMP4Q99727 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TIMP4Q99727 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP4Q99727 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TIMP4Q99727 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.07■□□□□ 0.32
TIMP4Q99727 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP4Q99727 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.07■□□□□ 0.32
TIMP4Q99727 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.07■□□□□ 0.32
TIMP4Q99727 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TIMP4Q99727 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.07■□□□□ 0.32
TIMP4Q99727 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP4Q99727 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.07■□□□□ 0.32
TIMP4Q99727 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.06■□□□□ 0.32
TIMP4Q99727 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.06■□□□□ 0.32
TIMP4Q99727 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.06■□□□□ 0.32
TIMP4Q99727 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP4Q99727 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TIMP4Q99727 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
TIMP4Q99727 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TIMP4Q99727 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP4Q99727 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.06■□□□□ 0.32
TIMP4Q99727 RNF152P1-201ENST00000397754 604 ntBASIC17.06■□□□□ 0.32
TIMP4Q99727 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.06■□□□□ 0.32
TIMP4Q99727 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TIMP4Q99727 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.06■□□□□ 0.32
TIMP4Q99727 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TIMP4Q99727 YBX1P2-201ENST00000489612 999 ntBASIC17.06■□□□□ 0.32
TIMP4Q99727 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP4Q99727 AC063952.2-201ENST00000498792 1227 ntBASIC17.06■□□□□ 0.32
TIMP4Q99727 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.06■□□□□ 0.32
TIMP4Q99727 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.06■□□□□ 0.32
TIMP4Q99727 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.06■□□□□ 0.32
TIMP4Q99727 AL031432.5-201ENST00000641059 760 ntBASIC17.06■□□□□ 0.32
TIMP4Q99727 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
TIMP4Q99727 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TIMP4Q99727 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP4Q99727 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.06■□□□□ 0.32
TIMP4Q99727 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP4Q99727 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP4Q99727 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP4Q99727 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP4Q99727 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TIMP4Q99727 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP4Q99727 AC018470.1-201ENST00000624790 3129 ntBASIC17.05■□□□□ 0.32
TIMP4Q99727 NOC2LP1-202ENST00000452600 2235 ntBASIC17.05■□□□□ 0.32
TIMP4Q99727 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP4Q99727 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP4Q99727 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.05■□□□□ 0.32
TIMP4Q99727 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TIMP4Q99727 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP4Q99727 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP4Q99727 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP4Q99727 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.05■□□□□ 0.32
TIMP4Q99727 TSPY5P-201ENST00000426936 936 ntBASIC17.05■□□□□ 0.32
TIMP4Q99727 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.05■□□□□ 0.32
TIMP4Q99727 AC011558.1-201ENST00000623459 338 ntBASIC17.05■□□□□ 0.32
TIMP4Q99727 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TIMP4Q99727 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP4Q99727 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP4Q99727 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
TIMP4Q99727 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.05■□□□□ 0.32
TIMP4Q99727 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP4Q99727 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP4Q99727 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP4Q99727 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP4Q99727 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMP4Q99727 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP4Q99727 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP4Q99727 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMP4Q99727 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP4Q99727 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TIMP4Q99727 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP4Q99727 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP4Q99727 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.04■□□□□ 0.32
TIMP4Q99727 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP4Q99727 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP4Q99727 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP4Q99727 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.04■□□□□ 0.32
TIMP4Q99727 AC022616.7-201ENST00000525383 220 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms