Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC124864.1-201ENST00000623408 392 ntBASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.75■□□□□ 0.43
CNTNAP3BQ96NU0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 POM121L3P-201ENST00000419331 1163 ntBASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 MIR5100-201ENST00000579544 119 ntBASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 AL592071.1-201ENST00000611956 408 ntBASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3BQ96NU0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 AC132008.2-207ENST00000454517 770 ntBASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 AC092910.1-201ENST00000482027 1129 ntBASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 AC091607.1-201ENST00000490318 1060 ntBASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 AL008721.1-201ENST00000609964 604 ntBASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3BQ96NU0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 AC254562.1-201ENST00000417586 456 ntBASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 AP003733.1-201ENST00000491725 852 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms