Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.74■■□□□ 1.07
CDCA5Q96FF9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.74■■□□□ 1.07
CDCA5Q96FF9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA5Q96FF9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CDCA5Q96FF9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CDCA5Q96FF9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA5Q96FF9 FEM1AP3-201ENST00000403722 1741 ntBASIC21.74■■□□□ 1.07
CDCA5Q96FF9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.74■■□□□ 1.07
CDCA5Q96FF9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CDCA5Q96FF9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA5Q96FF9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 AC098831.1-202ENST00000438821 336 ntBASIC21.73■■□□□ 1.07
CDCA5Q96FF9 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 LINC02084-201ENST00000606069 1096 ntBASIC21.73■■□□□ 1.07
CDCA5Q96FF9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.73■■□□□ 1.07
CDCA5Q96FF9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA5Q96FF9 LINC01521-201ENST00000504184 1943 ntBASIC21.72■■□□□ 1.07
CDCA5Q96FF9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.72■■□□□ 1.07
CDCA5Q96FF9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.72■■□□□ 1.07
CDCA5Q96FF9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.72■■□□□ 1.07
CDCA5Q96FF9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA5Q96FF9 MED15P5-201ENST00000423150 992 ntBASIC21.72■■□□□ 1.07
CDCA5Q96FF9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA5Q96FF9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.72■■□□□ 1.07
CDCA5Q96FF9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.72■■□□□ 1.07
CDCA5Q96FF9 FAM197Y3-203ENST00000618346 717 ntBASIC21.72■■□□□ 1.07
CDCA5Q96FF9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA5Q96FF9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA5Q96FF9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA5Q96FF9 AC007375.3-201ENST00000600936 2314 ntBASIC21.72■■□□□ 1.07
CDCA5Q96FF9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA5Q96FF9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA5Q96FF9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 RPSAP43-201ENST00000402237 625 ntBASIC21.71■■□□□ 1.07
CDCA5Q96FF9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 AC068587.9-201ENST00000641814 219 ntBASIC21.71■■□□□ 1.07
CDCA5Q96FF9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 AL357033.4-201ENST00000617703 1807 ntBASIC21.71■■□□□ 1.07
CDCA5Q96FF9 KRT8P50-201ENST00000562022 1438 ntBASIC21.71■■□□□ 1.07
CDCA5Q96FF9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA5Q96FF9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDCA5Q96FF9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDCA5Q96FF9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDCA5Q96FF9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 AC034105.1-201ENST00000563488 319 ntBASIC21.7■■□□□ 1.06
CDCA5Q96FF9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 AP001160.2-201ENST00000596071 487 ntBASIC21.7■■□□□ 1.06
CDCA5Q96FF9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.7■■□□□ 1.06
CDCA5Q96FF9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CDCA5Q96FF9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CDCA5Q96FF9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA5Q96FF9 IRX1P1-201ENST00000438849 1838 ntBASIC21.69■■□□□ 1.06
CDCA5Q96FF9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms