Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 TMPOP1-202ENST00000424642 1267 ntBASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 KRT18P57-201ENST00000443599 1254 ntBASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 ATP5G1P1-201ENST00000448724 379 ntBASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 AL512604.3-201ENST00000569583 964 ntBASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 AL138966.2-201ENST00000621997 464 ntBASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 AC073508.3-201ENST00000619697 1419 ntBASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 RN7SL850P-201ENST00000579959 291 ntBASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 AL499627.1-201ENST00000569373 2188 ntBASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD3Q7Z3D4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 AC141257.4-201ENST00000634557 245 ntBASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 AC136944.6-201ENST00000634818 245 ntBASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LYSMD3Q7Z3D4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms