Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 FP475955.4-201ENST00000623131 1990 ntBASIC18.09■□□□□ 0.49
CACNA1EQ15878 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 AC113404.2-201ENST00000507884 177 ntBASIC18.09■□□□□ 0.49
CACNA1EQ15878 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CACNA1EQ15878 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CACNA1EQ15878 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CACNA1EQ15878 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CACNA1EQ15878 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CACNA1EQ15878 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1EQ15878 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1EQ15878 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1EQ15878 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.08■□□□□ 0.48
CACNA1EQ15878 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.08■□□□□ 0.48
CACNA1EQ15878 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.08■□□□□ 0.48
CACNA1EQ15878 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1EQ15878 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1EQ15878 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CACNA1EQ15878 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1EQ15878 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1EQ15878 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1EQ15878 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1EQ15878 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CACNA1EQ15878 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1EQ15878 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.08■□□□□ 0.48
CACNA1EQ15878 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 PGAM5P1-201ENST00000518923 814 ntBASIC18.07■□□□□ 0.48
CACNA1EQ15878 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 FEM1AP3-201ENST00000403722 1741 ntBASIC18.07■□□□□ 0.48
CACNA1EQ15878 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 HEIH-201ENST00000623091 1652 ntBASIC18.07■□□□□ 0.48
CACNA1EQ15878 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 NUS1P2-201ENST00000417358 873 ntBASIC18.07■□□□□ 0.48
CACNA1EQ15878 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 AF186996.4-201ENST00000467186 377 ntBASIC18.07■□□□□ 0.48
CACNA1EQ15878 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 AL139424.1-201ENST00000607572 797 ntBASIC18.07■□□□□ 0.48
CACNA1EQ15878 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 AL357033.4-201ENST00000617703 1807 ntBASIC18.07■□□□□ 0.48
CACNA1EQ15878 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1EQ15878 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.07■□□□□ 0.48
CACNA1EQ15878 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1EQ15878 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CACNA1EQ15878 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1EQ15878 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CACNA1EQ15878 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1EQ15878 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.06■□□□□ 0.48
CACNA1EQ15878 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.06■□□□□ 0.48
CACNA1EQ15878 AC005336.2-201ENST00000593183 939 ntBASIC18.06■□□□□ 0.48
CACNA1EQ15878 AL355385.1-201ENST00000606123 409 ntBASIC18.06■□□□□ 0.48
CACNA1EQ15878 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.06■□□□□ 0.48
CACNA1EQ15878 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1EQ15878 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1EQ15878 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CACNA1EQ15878 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1EQ15878 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms