Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CENPAP49450 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CENPAP49450 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.88■□□□□ 0.29
CENPAP49450 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CENPAP49450 AC124016.1-201ENST00000609552 612 ntBASIC16.88■□□□□ 0.29
CENPAP49450 AC110285.5-201ENST00000611501 352 ntBASIC16.88■□□□□ 0.29
CENPAP49450 AC073648.6-201ENST00000641589 218 ntBASIC16.88■□□□□ 0.29
CENPAP49450 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CENPAP49450 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CENPAP49450 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CENPAP49450 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CENPAP49450 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CENPAP49450 AC090164.3-201ENST00000610780 2143 ntBASIC16.88■□□□□ 0.29
CENPAP49450 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CENPAP49450 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CENPAP49450 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CENPAP49450 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CENPAP49450 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.88■□□□□ 0.29
CENPAP49450 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CENPAP49450 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CENPAP49450 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.87■□□□□ 0.29
CENPAP49450 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.87■□□□□ 0.29
CENPAP49450 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CENPAP49450 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.87■□□□□ 0.29
CENPAP49450 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 AP002982.1-201ENST00000492365 877 ntBASIC16.87■□□□□ 0.29
CENPAP49450 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.87■□□□□ 0.29
CENPAP49450 CD99P1-205ENST00000527459 561 ntBASIC16.87■□□□□ 0.29
CENPAP49450 C1QBPP2-201ENST00000528754 825 ntBASIC16.87■□□□□ 0.29
CENPAP49450 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.87■□□□□ 0.29
CENPAP49450 RN7SL471P-201ENST00000580476 299 ntBASIC16.87■□□□□ 0.29
CENPAP49450 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.87■□□□□ 0.29
CENPAP49450 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.87■□□□□ 0.29
CENPAP49450 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.87■□□□□ 0.29
CENPAP49450 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.87■□□□□ 0.29
CENPAP49450 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.87■□□□□ 0.29
CENPAP49450 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.87■□□□□ 0.29
CENPAP49450 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPAP49450 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.87■□□□□ 0.29
CENPAP49450 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.87■□□□□ 0.29
CENPAP49450 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CENPAP49450 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.86■□□□□ 0.29
CENPAP49450 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.86■□□□□ 0.29
CENPAP49450 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.86■□□□□ 0.29
CENPAP49450 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CENPAP49450 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.86■□□□□ 0.29
CENPAP49450 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.86■□□□□ 0.29
CENPAP49450 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.86■□□□□ 0.29
CENPAP49450 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.86■□□□□ 0.29
CENPAP49450 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CENPAP49450 AC131212.4-201ENST00000623606 975 ntBASIC16.86■□□□□ 0.29
CENPAP49450 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CENPAP49450 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CENPAP49450 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CENPAP49450 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.86■□□□□ 0.29
CENPAP49450 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CENPAP49450 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CENPAP49450 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CENPAP49450 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.85■□□□□ 0.29
CENPAP49450 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms