Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 MYLKP1-201ENST00000509077 1580 ntBASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 CD177P1-201ENST00000606252 935 ntBASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 FSCN1P1-201ENST00000568912 1481 ntBASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 AL109659.2-201ENST00000606809 1674 ntBASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 FAM201B-201ENST00000458407 597 ntBASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 AC098590.1-201ENST00000468126 897 ntBASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 MYC-208ENST00000641036 567 ntBASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV7S3A2A0A539 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 GPAT2P1-201ENST00000444924 1672 ntBASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 AL023284.2-201ENST00000405850 579 ntBASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV7S3A2A0A539 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms