Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 HES2-202ENST00000377836 507 ntTSL 2 BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 AC132008.2-207ENST00000454517 770 ntBASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 PMS2P7-201ENST00000506558 1336 ntBASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 AC018712.1-201ENST00000455767 687 ntBASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
RTCBQ9Y3I0 IRX1P1-201ENST00000438849 1838 ntBASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 AC092183.1-201ENST00000469884 875 ntBASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 TERC-201ENST00000602385 541 ntBASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.45■■□□□ 1.34
RTCBQ9Y3I0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 RPL13AP23-201ENST00000480739 586 ntBASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 AC139887.3-201ENST00000568585 713 ntBASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 AL049840.3-201ENST00000602669 611 ntBASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 AC068587.9-201ENST00000641814 219 ntBASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTCBQ9Y3I0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTCBQ9Y3I0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
RTCBQ9Y3I0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.43■■□□□ 1.34
RTCBQ9Y3I0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.43■■□□□ 1.34
RTCBQ9Y3I0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.43■■□□□ 1.34
RTCBQ9Y3I0 MIR7706-201ENST00000613747 67 ntBASIC23.43■■□□□ 1.34
RTCBQ9Y3I0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTCBQ9Y3I0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.43■■□□□ 1.34
RTCBQ9Y3I0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC23.43■■□□□ 1.34
RTCBQ9Y3I0 LINC01006-201ENST00000333319 2292 ntBASIC23.43■■□□□ 1.34
RTCBQ9Y3I0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTCBQ9Y3I0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTCBQ9Y3I0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTCBQ9Y3I0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms