Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC104417.2-201ENST00000562989 1793 ntBASIC15.68■□□□□ 0.1
FOXC2Q99958 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXC2Q99958 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXC2Q99958 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXC2Q99958 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXC2Q99958 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXC2Q99958 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXC2Q99958 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
FOXC2Q99958 AL139424.1-201ENST00000607572 797 ntBASIC15.68■□□□□ 0.1
FOXC2Q99958 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXC2Q99958 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXC2Q99958 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXC2Q99958 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXC2Q99958 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FOXC2Q99958 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 IGHGP-201ENST00000390555 1178 ntBASIC15.67■□□□□ 0.1
FOXC2Q99958 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.67■□□□□ 0.1
FOXC2Q99958 PMS2P2-201ENST00000425039 1128 ntBASIC15.67■□□□□ 0.1
FOXC2Q99958 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.67■□□□□ 0.1
FOXC2Q99958 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXC2Q99958 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 AC140113.2-201ENST00000604370 208 ntBASIC15.67■□□□□ 0.1
FOXC2Q99958 AL591684.3-201ENST00000605187 298 ntBASIC15.67■□□□□ 0.1
FOXC2Q99958 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXC2Q99958 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXC2Q99958 AC148477.8-201ENST00000624298 468 ntBASIC15.67■□□□□ 0.1
FOXC2Q99958 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXC2Q99958 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
FOXC2Q99958 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
FOXC2Q99958 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FOXC2Q99958 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXC2Q99958 HOXB1-202ENST00000577092 1414 ntBASIC15.67■□□□□ 0.1
FOXC2Q99958 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
FOXC2Q99958 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXC2Q99958 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.66■□□□□ 0.1
FOXC2Q99958 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FOXC2Q99958 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.66■□□□□ 0.1
FOXC2Q99958 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FOXC2Q99958 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXC2Q99958 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
FOXC2Q99958 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXC2Q99958 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXC2Q99958 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXC2Q99958 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXC2Q99958 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXC2Q99958 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FOXC2Q99958 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
FOXC2Q99958 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXC2Q99958 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXC2Q99958 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.66■□□□□ 0.1
FOXC2Q99958 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
FOXC2Q99958 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.66■□□□□ 0.1
FOXC2Q99958 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.66■□□□□ 0.1
FOXC2Q99958 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.66■□□□□ 0.1
FOXC2Q99958 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.66■□□□□ 0.1
FOXC2Q99958 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.66■□□□□ 0.1
FOXC2Q99958 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
FOXC2Q99958 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.66■□□□□ 0.1
FOXC2Q99958 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
FOXC2Q99958 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FOXC2Q99958 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
FOXC2Q99958 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.66■□□□□ 0.1
FOXC2Q99958 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
FOXC2Q99958 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXC2Q99958 AC022898.2-201ENST00000616822 1312 ntBASIC15.66■□□□□ 0.1
FOXC2Q99958 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
FOXC2Q99958 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXC2Q99958 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
FOXC2Q99958 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXC2Q99958 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms