Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCNX1Q96RV3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 KRT18P67-201ENST00000432816 1264 ntBASIC16.41■□□□□ 0.22
PCNX1Q96RV3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 AC034236.2-201ENST00000606662 1610 ntBASIC16.41■□□□□ 0.22
PCNX1Q96RV3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 KRT18P58-201ENST00000527480 1120 ntBASIC16.41■□□□□ 0.22
PCNX1Q96RV3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCNX1Q96RV3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 AL031284.1-201ENST00000419297 478 ntBASIC16.4■□□□□ 0.22
PCNX1Q96RV3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 IGHV3-47-201ENST00000425060 335 ntBASIC16.4■□□□□ 0.22
PCNX1Q96RV3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 AP005901.3-202ENST00000581653 237 ntBASIC16.4■□□□□ 0.22
PCNX1Q96RV3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 AC024563.2-201ENST00000603282 481 ntBASIC16.4■□□□□ 0.22
PCNX1Q96RV3 AL353801.3-201ENST00000609898 542 ntBASIC16.4■□□□□ 0.22
PCNX1Q96RV3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCNX1Q96RV3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCNX1Q96RV3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
PCNX1Q96RV3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCNX1Q96RV3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
PCNX1Q96RV3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 KRT8P7-201ENST00000533003 1432 ntBASIC16.39■□□□□ 0.21
PCNX1Q96RV3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 AL390719.2-201ENST00000606993 987 ntBASIC16.39■□□□□ 0.21
PCNX1Q96RV3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 AL592071.1-201ENST00000611956 408 ntBASIC16.39■□□□□ 0.21
PCNX1Q96RV3 TP73-AS1-207ENST00000624167 988 ntBASIC16.39■□□□□ 0.21
PCNX1Q96RV3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCNX1Q96RV3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms