Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.55■□□□□ 0.88
KLHDC9Q8NEP7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.55■□□□□ 0.88
KLHDC9Q8NEP7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.55■□□□□ 0.88
KLHDC9Q8NEP7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KLHDC9Q8NEP7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KLHDC9Q8NEP7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KLHDC9Q8NEP7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KLHDC9Q8NEP7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KLHDC9Q8NEP7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KLHDC9Q8NEP7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 AC148477.8-201ENST00000624298 468 ntBASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KLHDC9Q8NEP7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 AL357033.4-201ENST00000617703 1807 ntBASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.53■□□□□ 0.88
KLHDC9Q8NEP7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 KRT18P41-201ENST00000518924 1277 ntBASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 AC141586.3-201ENST00000562166 1838 ntBASIC20.52■□□□□ 0.88
KLHDC9Q8NEP7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
KLHDC9Q8NEP7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 AC114341.1-201ENST00000618070 349 ntBASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms