Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 POM121L3P-201ENST00000419331 1163 ntBASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 TEX21P-204ENST00000641479 1693 ntBASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 KRT8P32-201ENST00000512863 1461 ntBASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 AL031284.1-201ENST00000419297 478 ntBASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A3Q8N4M1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 KRT18P58-201ENST00000527480 1120 ntBASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC44A3Q8N4M1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 KRT18P67-201ENST00000432816 1264 ntBASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 MIR5100-201ENST00000579544 119 ntBASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 AL591684.3-201ENST00000605187 298 ntBASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 AC148477.8-201ENST00000624298 468 ntBASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A3Q8N4M1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms