Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AL158211.5-201ENST00000623583 2518 ntBASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 AC096582.2-201ENST00000510860 516 ntBASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL27A1Q8IZC6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.52■□□□□ 0.4
COL27A1Q8IZC6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL27A1Q8IZC6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
COL27A1Q8IZC6 AC009065.1-201ENST00000564055 1225 ntBASIC17.52■□□□□ 0.4
COL27A1Q8IZC6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.52■□□□□ 0.4
COL27A1Q8IZC6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
COL27A1Q8IZC6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL27A1Q8IZC6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.52■□□□□ 0.4
COL27A1Q8IZC6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 FAM197Y8-203ENST00000450145 560 ntBASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 IGHV3-41-201ENST00000613121 348 ntBASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.52■□□□□ 0.39
COL27A1Q8IZC6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 AL024508.2-201ENST00000607749 1894 ntBASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 AL590627.1-203ENST00000421194 1026 ntBASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 AC145285.3-201ENST00000564603 959 ntBASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL27A1Q8IZC6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms