Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.21■□□□□ 0.18
LRRTM1Q86UE6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRTM1Q86UE6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRTM1Q86UE6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LRRTM1Q86UE6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRTM1Q86UE6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 KRT8P45-201ENST00000414328 1447 ntBASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 AC138028.4-201ENST00000564984 1845 ntBASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 SLC29A4P1-201ENST00000398760 971 ntBASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 TSPY6P-201ENST00000448518 926 ntBASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 AC012313.1-201ENST00000593393 3059 ntBASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM1Q86UE6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 AL357033.4-201ENST00000617703 1807 ntBASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LRRTM1Q86UE6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 NBPF21P-201ENST00000425093 1451 ntBASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 AC006970.2-201ENST00000450065 779 ntBASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 Z85996.1-201ENST00000494644 937 ntBASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms