Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 SLC25A1P1-201ENST00000528351 927 ntBASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 Z98044.1-201ENST00000632503 1764 ntBASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNKSR3Q6P9H4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.02■□□□□ 0.8
CNKSR3Q6P9H4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNKSR3Q6P9H4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNKSR3Q6P9H4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNKSR3Q6P9H4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CNKSR3Q6P9H4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.02■□□□□ 0.8
CNKSR3Q6P9H4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNKSR3Q6P9H4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.02■□□□□ 0.8
CNKSR3Q6P9H4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.02■□□□□ 0.8
CNKSR3Q6P9H4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNKSR3Q6P9H4 AC114341.1-201ENST00000618070 349 ntBASIC20.02■□□□□ 0.8
CNKSR3Q6P9H4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.02■□□□□ 0.8
CNKSR3Q6P9H4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNKSR3Q6P9H4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNKSR3Q6P9H4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.02■□□□□ 0.79
CNKSR3Q6P9H4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNKSR3Q6P9H4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNKSR3Q6P9H4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CNKSR3Q6P9H4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNKSR3Q6P9H4 KRT8P50-201ENST00000562022 1438 ntBASIC20.02■□□□□ 0.79
CNKSR3Q6P9H4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 AC093909.1-201ENST00000504731 1122 ntBASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 AC096582.2-201ENST00000510860 516 ntBASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 KRT18P58-201ENST00000527480 1120 ntBASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNKSR3Q6P9H4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 RNPS1P1-201ENST00000507437 918 ntBASIC20■□□□□ 0.79
CNKSR3Q6P9H4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 AC008608.2-201ENST00000606089 416 ntBASIC20■□□□□ 0.79
CNKSR3Q6P9H4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CNKSR3Q6P9H4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms