Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17■□□□□ 0.31
NIPAL3Q6P499 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
NIPAL3Q6P499 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17■□□□□ 0.31
NIPAL3Q6P499 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17■□□□□ 0.31
NIPAL3Q6P499 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17■□□□□ 0.31
NIPAL3Q6P499 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17■□□□□ 0.31
NIPAL3Q6P499 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17■□□□□ 0.31
NIPAL3Q6P499 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17■□□□□ 0.31
NIPAL3Q6P499 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17■□□□□ 0.31
NIPAL3Q6P499 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 AC073592.3-201ENST00000625118 1834 ntBASIC16.99■□□□□ 0.31
NIPAL3Q6P499 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 B3GAT3P1-201ENST00000471720 806 ntBASIC16.99■□□□□ 0.31
NIPAL3Q6P499 AC011506.1-201ENST00000474329 610 ntBASIC16.99■□□□□ 0.31
NIPAL3Q6P499 AC091390.4-202ENST00000476426 537 ntBASIC16.99■□□□□ 0.31
NIPAL3Q6P499 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NIPAL3Q6P499 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 ABALON-201ENST00000629058 1903 ntBASIC16.98■□□□□ 0.31
NIPAL3Q6P499 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 MIR4785-201ENST00000585005 73 ntBASIC16.98■□□□□ 0.31
NIPAL3Q6P499 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NIPAL3Q6P499 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 AC126763.1-201ENST00000552015 2118 ntBASIC16.97■□□□□ 0.31
NIPAL3Q6P499 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 TSPY23P-201ENST00000440136 739 ntBASIC16.97■□□□□ 0.31
NIPAL3Q6P499 FAM207BP-201ENST00000447172 505 ntBASIC16.97■□□□□ 0.31
NIPAL3Q6P499 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 AP003071.4-201ENST00000562276 1284 ntBASIC16.97■□□□□ 0.31
NIPAL3Q6P499 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms