Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 AC015911.4-201ENST00000588022 1070 ntBASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL13A1Q5TAT6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL13A1Q5TAT6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL13A1Q5TAT6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL13A1Q5TAT6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL13A1Q5TAT6 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.89■□□□□ 0.93
COL13A1Q5TAT6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.89■□□□□ 0.93
COL13A1Q5TAT6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.89■□□□□ 0.93
COL13A1Q5TAT6 GPR53P-205ENST00000457298 1084 ntBASIC20.89■□□□□ 0.93
COL13A1Q5TAT6 RN7SL692P-201ENST00000464677 288 ntBASIC20.89■□□□□ 0.93
COL13A1Q5TAT6 AC067863.1-201ENST00000494933 530 ntBASIC20.89■□□□□ 0.93
COL13A1Q5TAT6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.89■□□□□ 0.93
COL13A1Q5TAT6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.89■□□□□ 0.93
COL13A1Q5TAT6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL13A1Q5TAT6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL13A1Q5TAT6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL13A1Q5TAT6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 AC125634.1-201ENST00000438758 1403 ntBASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 KRT8P7-201ENST00000533003 1432 ntBASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 KRT18P27-201ENST00000427733 1299 ntBASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 ACTG1P14-201ENST00000446382 1122 ntBASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
COL13A1Q5TAT6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 FAM58CP-201ENST00000435741 640 ntBASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 AC023141.5-201ENST00000458585 616 ntBASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 HILS1-202ENST00000545329 423 ntBASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 AC105339.1-204ENST00000636249 355 ntBASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
COL13A1Q5TAT6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 AC003669.1-201ENST00000334569 611 ntBASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 AC073621.1-201ENST00000392730 636 ntBASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.86■□□□□ 0.93
COL13A1Q5TAT6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 AL133338.1-201ENST00000565695 1517 ntBASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 AC121338.2-201ENST00000622535 1744 ntBASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms