Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CMC4P56277 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.9□□□□□ -0.18
CMC4P56277 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CMC4P56277 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 TERF1P1-201ENST00000311003 1181 ntBASIC13.9□□□□□ -0.18
CMC4P56277 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.9□□□□□ -0.18
CMC4P56277 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 AC005521.1-201ENST00000393351 872 ntBASIC13.9□□□□□ -0.18
CMC4P56277 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CMC4P56277 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CMC4P56277 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
CMC4P56277 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.9□□□□□ -0.18
CMC4P56277 KRT18P41-201ENST00000518924 1277 ntBASIC13.9□□□□□ -0.18
CMC4P56277 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.9□□□□□ -0.18
CMC4P56277 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.9□□□□□ -0.18
CMC4P56277 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.9□□□□□ -0.18
CMC4P56277 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.9□□□□□ -0.18
CMC4P56277 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CMC4P56277 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 AL138966.2-201ENST00000621997 464 ntBASIC13.9□□□□□ -0.18
CMC4P56277 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.9□□□□□ -0.18
CMC4P56277 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.9□□□□□ -0.18
CMC4P56277 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CMC4P56277 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CMC4P56277 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.9□□□□□ -0.18
CMC4P56277 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
CMC4P56277 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC13.9□□□□□ -0.18
CMC4P56277 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.9□□□□□ -0.18
CMC4P56277 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CMC4P56277 KRT8P45-201ENST00000414328 1447 ntBASIC13.9□□□□□ -0.19
CMC4P56277 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CMC4P56277 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CMC4P56277 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.89□□□□□ -0.19
CMC4P56277 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 INGX-201ENST00000359239 846 ntBASIC13.89□□□□□ -0.19
CMC4P56277 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.89□□□□□ -0.19
CMC4P56277 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CMC4P56277 KRT18P23-201ENST00000435622 1283 ntBASIC13.89□□□□□ -0.19
CMC4P56277 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.89□□□□□ -0.19
CMC4P56277 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CMC4P56277 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.89□□□□□ -0.19
CMC4P56277 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.89□□□□□ -0.19
CMC4P56277 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CMC4P56277 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CMC4P56277 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CMC4P56277 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CMC4P56277 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CMC4P56277 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMC4P56277 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMC4P56277 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.88□□□□□ -0.19
CMC4P56277 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.88□□□□□ -0.19
CMC4P56277 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMC4P56277 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CMC4P56277 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CMC4P56277 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.88□□□□□ -0.19
CMC4P56277 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMC4P56277 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CMC4P56277 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC13.88□□□□□ -0.19
CMC4P56277 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CMC4P56277 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CMC4P56277 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CMC4P56277 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms