Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Gm27306-201ENSMUST00000183970 107 ntBASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Mir8102-201ENSMUST00000184148 139 ntBASIC14.64□□□□□ -0.07
Tnfrsf17O88472 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf17O88472 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Gm5779-201ENSMUST00000218467 910 ntBASIC14.63□□□□□ -0.07
Tnfrsf17O88472 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf17O88472 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Gm43433-201ENSMUST00000196573 481 ntBASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf17O88472 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Gm27989-201ENSMUST00000184721 107 ntBASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Gm18057-201ENSMUST00000208220 503 ntBASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms