Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSC5DA1L4H1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSC5DA1L4H1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.71■■□□□ 1.07
SSC5DA1L4H1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSC5DA1L4H1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSC5DA1L4H1 MTMR9LP-203ENST00000426597 1545 ntBASIC21.71■■□□□ 1.07
SSC5DA1L4H1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SSC5DA1L4H1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 FGFR3P6-201ENST00000457012 610 ntBASIC21.7■■□□□ 1.06
SSC5DA1L4H1 RNPS1P1-201ENST00000507437 918 ntBASIC21.7■■□□□ 1.06
SSC5DA1L4H1 MIR5100-201ENST00000579544 119 ntBASIC21.7■■□□□ 1.06
SSC5DA1L4H1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 AC092865.5-201ENST00000545435 363 ntBASIC21.7■■□□□ 1.06
SSC5DA1L4H1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 AL591684.3-201ENST00000605187 298 ntBASIC21.7■■□□□ 1.06
SSC5DA1L4H1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SSC5DA1L4H1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSC5DA1L4H1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.69■■□□□ 1.06
SSC5DA1L4H1 FP475955.4-201ENST00000623131 1990 ntBASIC21.69■■□□□ 1.06
SSC5DA1L4H1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSC5DA1L4H1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSC5DA1L4H1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.69■■□□□ 1.06
SSC5DA1L4H1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.69■■□□□ 1.06
SSC5DA1L4H1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.69■■□□□ 1.06
SSC5DA1L4H1 MIR1233-2-201ENST00000408138 82 ntBASIC21.69■■□□□ 1.06
SSC5DA1L4H1 MIR1233-1-201ENST00000408722 82 ntBASIC21.69■■□□□ 1.06
SSC5DA1L4H1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.69■■□□□ 1.06
SSC5DA1L4H1 HNRNPDP1-201ENST00000439535 754 ntBASIC21.69■■□□□ 1.06
SSC5DA1L4H1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.69■■□□□ 1.06
SSC5DA1L4H1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSC5DA1L4H1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.69■■□□□ 1.06
SSC5DA1L4H1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.69■■□□□ 1.06
SSC5DA1L4H1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 AC092183.1-201ENST00000469884 875 ntBASIC21.68■■□□□ 1.06
SSC5DA1L4H1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSC5DA1L4H1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSC5DA1L4H1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSC5DA1L4H1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSC5DA1L4H1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSC5DA1L4H1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.67■■□□□ 1.06
SSC5DA1L4H1 AL355877.3-201ENST00000622820 899 ntBASIC21.67■■□□□ 1.06
SSC5DA1L4H1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.67■■□□□ 1.06
SSC5DA1L4H1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
SSC5DA1L4H1 AC141586.3-201ENST00000562166 1838 ntBASIC21.67■■□□□ 1.06
SSC5DA1L4H1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.67■■□□□ 1.06
SSC5DA1L4H1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SSC5DA1L4H1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.67■■□□□ 1.06
SSC5DA1L4H1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSC5DA1L4H1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 AC073648.2-201ENST00000510116 352 ntBASIC21.66■■□□□ 1.06
SSC5DA1L4H1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 AC139887.3-201ENST00000568585 713 ntBASIC21.66■■□□□ 1.06
SSC5DA1L4H1 AP001269.4-201ENST00000609611 512 ntBASIC21.66■■□□□ 1.06
SSC5DA1L4H1 FAM215A-202ENST00000632077 792 ntBASIC21.66■■□□□ 1.06
SSC5DA1L4H1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms