Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 AC004870.1-201ENST00000315132 882 ntBASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 HLA-F-220ENST00000434407 884 ntBASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 AL136038.4-201ENST00000603606 1261 ntBASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 Z82202.1-201ENST00000623446 1880 ntBASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.48■□□□□ 0.55
SNX11Q9Y5W9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 AC093525.10-201ENST00000625130 1569 ntBASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 AL391807.1-203ENST00000604392 2365 ntBASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX11Q9Y5W9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 CHCHD2P8-201ENST00000429873 447 ntBASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 FDX1P1-201ENST00000449115 551 ntBASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 MIR3917-201ENST00000580971 93 ntBASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 KRT18P1-202ENST00000452408 1331 ntBASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX11Q9Y5W9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 TSPY22P-201ENST00000427496 604 ntBASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SNX11Q9Y5W9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms