Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC23.83■■□□□ 1.4
USP16Q9Y5T5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
USP16Q9Y5T5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.82■■□□□ 1.4
USP16Q9Y5T5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP16Q9Y5T5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 DRAXINP1-201ENST00000437611 948 ntBASIC23.81■■□□□ 1.4
USP16Q9Y5T5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 RN7SL510P-201ENST00000581311 263 ntBASIC23.81■■□□□ 1.4
USP16Q9Y5T5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 AL357033.4-201ENST00000617703 1807 ntBASIC23.81■■□□□ 1.4
USP16Q9Y5T5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP16Q9Y5T5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP16Q9Y5T5 NFYC-AS1-201ENST00000606277 1687 ntBASIC23.79■■□□□ 1.4
USP16Q9Y5T5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 AC246785.2-201ENST00000432512 513 ntBASIC23.79■■□□□ 1.4
USP16Q9Y5T5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 NUS1P1-201ENST00000446295 882 ntBASIC23.79■■□□□ 1.4
USP16Q9Y5T5 AP003733.1-201ENST00000491725 852 ntBASIC23.79■■□□□ 1.4
USP16Q9Y5T5 AL691432.3-201ENST00000621860 400 ntBASIC23.79■■□□□ 1.4
USP16Q9Y5T5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
USP16Q9Y5T5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 Z98044.1-201ENST00000632503 1764 ntBASIC23.78■■□□□ 1.4
USP16Q9Y5T5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 AL845331.1-201ENST00000424978 1190 ntBASIC23.78■■□□□ 1.4
USP16Q9Y5T5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 MIR3180-4-201ENST00000582223 153 ntBASIC23.78■■□□□ 1.4
USP16Q9Y5T5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 AL390719.2-201ENST00000606993 987 ntBASIC23.78■■□□□ 1.4
USP16Q9Y5T5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms