Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT6Q9ULM6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 GPAT2P1-201ENST00000444924 1672 ntBASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 AL049812.1-201ENST00000432563 2267 ntBASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 KRT8P45-201ENST00000414328 1447 ntBASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT6Q9ULM6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 AL023284.2-201ENST00000405850 579 ntBASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT6Q9ULM6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 AL512353.2-201ENST00000448759 1962 ntBASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CNOT6Q9ULM6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 TMPOP1-202ENST00000424642 1267 ntBASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 LIN28AP1-201ENST00000429574 405 ntBASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CNOT6Q9ULM6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms