Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 TPSP2-201ENST00000561760 610 ntBASIC21.22■□□□□ 0.99
FBXO40Q9UH90 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.22■□□□□ 0.99
FBXO40Q9UH90 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 AL390719.2-201ENST00000606993 987 ntBASIC21.21■□□□□ 0.99
FBXO40Q9UH90 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FBXO40Q9UH90 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.2■□□□□ 0.99
FBXO40Q9UH90 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
FBXO40Q9UH90 Z98044.1-201ENST00000632503 1764 ntBASIC21.2■□□□□ 0.99
FBXO40Q9UH90 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.2■□□□□ 0.99
FBXO40Q9UH90 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
FBXO40Q9UH90 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FBXO40Q9UH90 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 HEIH-201ENST00000623091 1652 ntBASIC21.19■□□□□ 0.98
FBXO40Q9UH90 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 LINC00265-3P-201ENST00000447588 903 ntBASIC21.19■□□□□ 0.98
FBXO40Q9UH90 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 GPR32P1-201ENST00000601788 811 ntBASIC21.19■□□□□ 0.98
FBXO40Q9UH90 AC024563.2-201ENST00000603282 481 ntBASIC21.19■□□□□ 0.98
FBXO40Q9UH90 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 AL032819.2-201ENST00000624543 2162 ntBASIC21.19■□□□□ 0.98
FBXO40Q9UH90 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FBXO40Q9UH90 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FBXO40Q9UH90 AC012615.1-201ENST00000565797 1299 ntBASIC21.18■□□□□ 0.98
FBXO40Q9UH90 RN7SL510P-201ENST00000581311 263 ntBASIC21.18■□□□□ 0.98
FBXO40Q9UH90 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms