Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ABCA3Q99758 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
ABCA3Q99758 AL357033.4-201ENST00000617703 1807 ntBASIC24.85■■□□□ 1.57
ABCA3Q99758 Z98044.1-201ENST00000632503 1764 ntBASIC24.85■■□□□ 1.57
ABCA3Q99758 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ABCA3Q99758 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
ABCA3Q99758 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
ABCA3Q99758 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ABCA3Q99758 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ABCA3Q99758 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC24.85■■□□□ 1.57
ABCA3Q99758 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC24.85■■□□□ 1.57
ABCA3Q99758 AL356488.2-201ENST00000602755 427 ntBASIC24.85■■□□□ 1.57
ABCA3Q99758 AL138831.2-201ENST00000606564 490 ntBASIC24.85■■□□□ 1.57
ABCA3Q99758 AC116407.3-201ENST00000623905 1129 ntBASIC24.85■■□□□ 1.57
ABCA3Q99758 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ABCA3Q99758 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
ABCA3Q99758 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ABCA3Q99758 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ABCA3Q99758 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC24.85■■□□□ 1.57
ABCA3Q99758 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ABCA3Q99758 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ABCA3Q99758 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
ABCA3Q99758 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.84■■□□□ 1.57
ABCA3Q99758 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
ABCA3Q99758 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ABCA3Q99758 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ABCA3Q99758 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ABCA3Q99758 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC24.84■■□□□ 1.57
ABCA3Q99758 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC24.84■■□□□ 1.57
ABCA3Q99758 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC24.84■■□□□ 1.57
ABCA3Q99758 Z83851.2-201ENST00000609564 659 ntBASIC24.84■■□□□ 1.57
ABCA3Q99758 MTMR9LP-203ENST00000426597 1545 ntBASIC24.84■■□□□ 1.57
ABCA3Q99758 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ABCA3Q99758 LINC01521-201ENST00000504184 1943 ntBASIC24.84■■□□□ 1.57
ABCA3Q99758 LBX2-AS1-202ENST00000603175 2083 ntBASIC24.84■■□□□ 1.57
ABCA3Q99758 AC068587.9-201ENST00000641814 219 ntBASIC24.83■■□□□ 1.57
ABCA3Q99758 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ABCA3Q99758 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ABCA3Q99758 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ABCA3Q99758 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ABCA3Q99758 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ABCA3Q99758 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ABCA3Q99758 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC24.83■■□□□ 1.57
ABCA3Q99758 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.83■■□□□ 1.57
ABCA3Q99758 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ABCA3Q99758 MEG3-211ENST00000452514 461 ntTSL 3 BASIC24.83■■□□□ 1.57
ABCA3Q99758 AC027796.2-201ENST00000575326 344 ntBASIC24.83■■□□□ 1.57
ABCA3Q99758 CYGB-205ENST00000590175 830 ntTSL 3 BASIC24.83■■□□□ 1.57
ABCA3Q99758 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC24.83■■□□□ 1.57
ABCA3Q99758 AC104109.2-201ENST00000602919 1418 ntBASIC24.83■■□□□ 1.56
ABCA3Q99758 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
ABCA3Q99758 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
ABCA3Q99758 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC24.83■■□□□ 1.56
ABCA3Q99758 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ABCA3Q99758 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ABCA3Q99758 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ABCA3Q99758 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.82■■□□□ 1.56
ABCA3Q99758 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ABCA3Q99758 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
ABCA3Q99758 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
ABCA3Q99758 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
ABCA3Q99758 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
ABCA3Q99758 AL591424.1-201ENST00000442569 1213 ntBASIC24.82■■□□□ 1.56
ABCA3Q99758 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ABCA3Q99758 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
ABCA3Q99758 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC24.82■■□□□ 1.56
ABCA3Q99758 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC24.82■■□□□ 1.56
ABCA3Q99758 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ABCA3Q99758 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC24.82■■□□□ 1.56
ABCA3Q99758 ANKRD20A8P-203ENST00000641373 517 ntBASIC24.82■■□□□ 1.56
ABCA3Q99758 AC112777.1-201ENST00000540175 1423 ntBASIC24.82■■□□□ 1.56
ABCA3Q99758 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ABCA3Q99758 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ABCA3Q99758 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
ABCA3Q99758 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ABCA3Q99758 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ABCA3Q99758 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ABCA3Q99758 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ABCA3Q99758 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
ABCA3Q99758 AC021087.4-201ENST00000563761 564 ntBASIC24.81■■□□□ 1.56
ABCA3Q99758 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
ABCA3Q99758 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC24.81■■□□□ 1.56
ABCA3Q99758 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC24.81■■□□□ 1.56
ABCA3Q99758 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.81■■□□□ 1.56
ABCA3Q99758 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
ABCA3Q99758 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ABCA3Q99758 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
ABCA3Q99758 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC24.81■■□□□ 1.56
ABCA3Q99758 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC24.81■■□□□ 1.56
ABCA3Q99758 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
ABCA3Q99758 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
ABCA3Q99758 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
ABCA3Q99758 MIR940-201ENST00000401276 94 ntBASIC24.81■■□□□ 1.56
ABCA3Q99758 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC24.81■■□□□ 1.56
ABCA3Q99758 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC24.81■■□□□ 1.56
ABCA3Q99758 MIR5100-201ENST00000579544 119 ntBASIC24.81■■□□□ 1.56
ABCA3Q99758 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC24.81■■□□□ 1.56
ABCA3Q99758 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ABCA3Q99758 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC24.8■■□□□ 1.56
ABCA3Q99758 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms