Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 BCRP1-201ENST00000444246 691 ntBASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 AL157888.1-201ENST00000631930 593 ntBASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.82■□□□□ 0.44
CNTNAP3BQ96NU0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 RPS2P1-201ENST00000434010 821 ntBASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 AC002347.1-201ENST00000569543 541 ntBASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 AC005332.3-201ENST00000589904 676 ntBASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 AL591684.3-201ENST00000605187 298 ntBASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 AL096865.1-201ENST00000606796 927 ntBASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CNTNAP3BQ96NU0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 FEM1AP4-201ENST00000443167 1987 ntBASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3BQ96NU0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 MINOS1P3-201ENST00000457048 203 ntBASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 DUX4L17-201ENST00000557360 1267 ntBASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms