Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00479Q96M42 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00479Q96M42 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00479Q96M42 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00479Q96M42 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LINC00479Q96M42 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00479Q96M42 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00479Q96M42 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 AC087623.3-201ENST00000607047 1098 ntBASIC14.27□□□□□ -0.13
LINC00479Q96M42 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 OR6D1P-202ENST00000641007 5290 ntBASIC14.27□□□□□ -0.13
LINC00479Q96M42 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00479Q96M42 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
LINC00479Q96M42 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 HEIH-201ENST00000623091 1652 ntBASIC14.26□□□□□ -0.13
LINC00479Q96M42 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.26□□□□□ -0.13
LINC00479Q96M42 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 BX276092.2-201ENST00000417668 665 ntBASIC14.26□□□□□ -0.13
LINC00479Q96M42 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.26□□□□□ -0.13
LINC00479Q96M42 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LINC00479Q96M42 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00479Q96M42 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00479Q96M42 AC080080.1-201ENST00000625121 2420 ntBASIC14.25□□□□□ -0.13
LINC00479Q96M42 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00479Q96M42 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00479Q96M42 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
LINC00479Q96M42 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC00479Q96M42 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LINC00479Q96M42 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00479Q96M42 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00479Q96M42 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00479Q96M42 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00479Q96M42 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00479Q96M42 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00479Q96M42 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00479Q96M42 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC00479Q96M42 TSPY21P-201ENST00000433481 731 ntBASIC14.25□□□□□ -0.13
LINC00479Q96M42 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LINC00479Q96M42 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00479Q96M42 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00479Q96M42 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms