Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 MIR564-202ENST00000385049 94 ntBASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 BX640515.1-201ENST00000617215 977 ntBASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 AC124864.1-201ENST00000623408 392 ntBASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SNRNP40Q96DI7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 Z82202.1-201ENST00000623446 1880 ntBASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 AKR1C7P-201ENST00000305623 895 ntBASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 AL590627.1-203ENST00000421194 1026 ntBASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 GUSBP12-201ENST00000513727 720 ntBASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 AL592071.1-201ENST00000611956 408 ntBASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRNP40Q96DI7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 TSPY12P-201ENST00000421279 868 ntBASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SNRNP40Q96DI7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.77■□□□□ 0.27
SNRNP40Q96DI7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNRNP40Q96DI7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNRNP40Q96DI7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.77■□□□□ 0.27
SNRNP40Q96DI7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SNRNP40Q96DI7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.77■□□□□ 0.27
SNRNP40Q96DI7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 IGHGP-201ENST00000390555 1178 ntBASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 SAPCD2P3-201ENST00000455031 850 ntBASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms