Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNIP1Q8TAD8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.58■□□□□ 0.41
SNIP1Q8TAD8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.58■□□□□ 0.41
SNIP1Q8TAD8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 AL031284.1-201ENST00000419297 478 ntBASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNIP1Q8TAD8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 KRT8P3-201ENST00000519669 1449 ntBASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 BX842568.4-201ENST00000421222 227 ntBASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 KRT18P67-201ENST00000432816 1264 ntBASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 AC106730.1-201ENST00000566722 1090 ntBASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 GPR32P1-201ENST00000601788 811 ntBASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 AL592071.1-201ENST00000611956 408 ntBASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 NSUN5P1-202ENST00000421140 1535 ntBASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 NSUN5P2-203ENST00000457352 1529 ntBASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.57■□□□□ 0.4
SNIP1Q8TAD8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 PMS2P7-201ENST00000506558 1336 ntBASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 NUS1P2-201ENST00000417358 873 ntBASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 FAM197Y8-203ENST00000450145 560 ntBASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 AC093909.1-201ENST00000504731 1122 ntBASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 AC010240.3-201ENST00000607688 395 ntBASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.56■□□□□ 0.4
SNIP1Q8TAD8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 AF186996.4-201ENST00000467186 377 ntBASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 GUSBP12-201ENST00000513727 720 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms