Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 AL162412.1-201ENST00000567129 965 ntBASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 AL356309.3-201ENST00000624132 1934 ntBASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD2Q8IV50 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 AL121761.2-201ENST00000598007 1648 ntBASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 AC142381.2-201ENST00000566120 298 ntBASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 MYCNOS-205ENST00000641950 531 ntBASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD2Q8IV50 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 MST1L-201ENST00000442552 2185 ntBASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 KRT18P14-201ENST00000534205 1250 ntBASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 PCDHB19P-201ENST00000570871 2371 ntBASIC16.4■□□□□ 0.22
LYSMD2Q8IV50 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.39■□□□□ 0.22
LYSMD2Q8IV50 AC093677.2-201ENST00000600169 1863 ntBASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms