Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 AL023803.3-201ENST00000615559 522 ntBASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 PCDHB18P-201ENST00000524813 2368 ntBASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 CA15P1-201ENST00000481698 905 ntBASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 AL355075.4-201ENST00000554988 638 ntBASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 FITM1-202ENST00000559294 800 ntBASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 MIR4785-201ENST00000585005 73 ntBASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.78■□□□□ 0.28
NHLRC1Q6VVB1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 CRYGFP-201ENST00000418459 633 ntBASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 AC066615.1-201ENST00000640911 628 ntBASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.77■□□□□ 0.28
NHLRC1Q6VVB1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NHLRC1Q6VVB1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.77■□□□□ 0.27
NHLRC1Q6VVB1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NHLRC1Q6VVB1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.77■□□□□ 0.27
NHLRC1Q6VVB1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NHLRC1Q6VVB1 AL133373.2-201ENST00000623187 2828 ntBASIC16.77■□□□□ 0.27
NHLRC1Q6VVB1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NHLRC1Q6VVB1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.76■□□□□ 0.27
NHLRC1Q6VVB1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms