Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 AK4P3-201ENST00000418260 669 ntBASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
RFWD3Q6PCD5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 AC009947.2-201ENST00000444014 672 ntBASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 AL512604.3-201ENST00000569583 964 ntBASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 CR769767.2-201ENST00000622735 460 ntBASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 AL023973.1-201ENST00000624619 620 ntBASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RFWD3Q6PCD5 AL161938.1-201ENST00000569833 2180 ntBASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 COX11P1-201ENST00000489116 835 ntBASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 YBX1P2-201ENST00000489612 999 ntBASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 WWOX-216ENST00000569818 525 ntBASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD3Q6PCD5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms